CDS
| Accession Number | TCMCG056C19370 |
| gbkey | CDS |
| Protein Id | XP_031392297.1 |
| Location | complement(join(30187669..30187729,30187908..30187976,30188072..30188188,30188739..30188851,30188955..30189029,30189120..30189245,30189635..30190611,30190728..30190784,30191283..30191924,30192105..30192282,30192400..30192543,30192628..30192702,30192970..30193040,30193249..30193351,30193505..30193736,30193963..30193985)) |
| Gene | LOC116204350 |
| GeneID | 116204350 |
| Organism | Punica granatum |
Protein
| Length | 1020aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA580467 |
| db_source | XM_031536437.1 |
| Definition | katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Punica granatum] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGACTTAGAAGAAGCAAAGACGTAGTGGTTCGTGGTCTTACTGGGCACAGATCGAATTGCACGTCTGTGGAATTTCATCCTTTCGGAGAATTTTTCGCATCCGGTTCCATGGACACTAATCTAAAGATATGGGATATCAGAAAGAAGGGTTGCATACACACATATAAGGGTCATACACGAAGCATTAGTACTATTAGATTCACTCCTGATGGTCGTTGGGTGGTTTCTGGTGGATACGATAATATTGTCAAGGTGTGGGATCTGACAGCTGGAAAGCTTTTGCACGATTTTAAGTTCCATGAGAATCACATCAGATCCATAGATTTCCACCCTTTGGAGTTTCTTCTTGCCACAGGATCAGCTGACCGAACTGTGAAATTCTGGGACTTGGAGACCTTTGAACTGATTGGATCGACTAGGCCTGAGGCTACAGGAGTTCGTTCAATCACCTTTCATCCCGATGGGAGGACCTTATTCTGTGGATTGGATGATAGCTTGAAGGTTTATTCATGGGAGCCCGTAATTTGTCATGATTCCATTGACATGGGATGGTCCACGCTCAGTGATCTCTGCATCCATGAAGGAAAACTTTTAGGTTGCTCTTATTATCAAAATTCGGTCGGAGTTTGGGTCTCAGATATATCGCTCATTGAGCCTTACGGAGCTAATCTAGTGCCTCCACAAAAGGATGTCATGCAACATGAATTTAACCTCCAGAAAAGCCATTCAGTGAAAAAAGGGAGTGATGAGAGATCAATTTCAAGTTTACGCTGTCCATCTCCTGATTATGAGACGAAAGAGATAAAGAACATATATGTGGACACTGCCAATGGAAATCCTGTTTGTTCCGAGAGAGTTGGTTCCTTAAGCTCTCCAAAAATAATATTGCCATTGGATTCCCCTGACATTGGTAGTCCGATGGTAAAGAAGCATACATCCTCTGCAAAAGGTTCTCCTGAAAAAGCAAGGGAGCAAGCATTTCTCAAATCTTTTTCAGTGCCTGACGTTGCTCTTCAGGAAAGCGCAGAAGGAAAAGACAGCTCTGTCCCTCGAAAAGAATCCATCACCTTTTCAAGGACGAAACCAGGGATGTTGCTTAAGCCTGCCCATAGAAGAAGGCCTTCAACTACAAAACTCGATGCTGAGGGGCTTTCTTTAACTGCCGAAATGAAAAATATCTCTGAAACAAAGAGCATTTCTGATAGTTCTGATCCCATGTTACCAAAGCTTACTGCACACAGGCGGAGGCTGTCGAGCACCAGATTTGATGTCGAGACTTTATCAGATTCTTCTGAAAGTAGAACTTTTAGTGAGACAAAGGTTGATTTCAATGGTCCTTTAGACACTGGCATCAAGATTGCTCCCGGGACTCCGAAAGAATCCCCTCAAGAAGACTGTTCTGATATCAAGAACGTGCCTGAGAAGATAGACAAAACATTGCCCCAAACCCCCAAAGATGAAAATCGCGATGAATCTCTTTGCAGCAGGCAAGGGATAACACCTGTCAAGATCGTCAATGGAGTTGCTGTCGTCCCGGGCCGAACACGAACCTTGGTCGAGAAGTTTGAAAGGAGGGAAATACTTAATAGTGCTGAAGAACAAACAACGGCCACTCCCCCTCAAGAATTGCCTGCAACAGATAAAGCGAACACATCTGTTCCTATGAGTTTCGAAAGGAAAGAAACTGTAAGTAGCAGTAGCAATCAATCAACTGATAGTTCCCCTAGCCTAATTTCAGCACGCAGTCAAACTCCTGCAACTTCAGTTTGTAGCTCTGAAAGCAGAGAAGAAATGCTTAAAAGCACGGAAGATCAAGAAACTAGTCGGCTGATCCCTTGCATGGAGCCCTCAAGGAGCAAGACGCCTCCAATTCCAAATAGTAGCATTGATAAAAGAGAGCGACATAATAGCAAGGAGGACCAAGAGACTGCTGTATCTCATAATGTGGTTGTGCTTGCAAGAGATAAAGCTCCGAGTTCTCAGGTGGATGCATTTGTTAGACGAGAACGACTCAGTATCAAGGAAGATAGAGAAGCCACAGCGGTCCCTAATGTTGTACTTGGAAAGGATAGAACACCTACATGCCGAGTTGGTAGCTCTGAACGGAGACAACGGTTGAACAAGGAAGATCAATCTGCGAGCATCATATCTCCTAACGTAGCTCTTGGAAGGGACAAGGTGCCCCCAAATCAAGTTGGTCGTTTCGAAAGAAGAGAGAGATTTAATAGCAAGGAGGATCAACCAACTAGGATTTCTTCACGTATTGCGCCTTCAAGGGAGAGGACGCCCCCAAGTTTGGGTGGAAGCATTCAGAGAAGAGAGAGATTAAGCTCTCCTGAAGATCAAGCGGCTAATCGTGTGTTACCTGTGATGGAGAGAACTACTGCAGCCGCAGGAAGCTTTGAAGAAAGAGAGAGATTTAATTCTACTATGGAGGATCAAGAGAGTAATATCCCTCTTCGTACGGTATCTGTTATTGATAAGATGGCCACTACACAGATGGGTGAGTCTCAAATTTTGGGGAGGGAACCAGACTCTGCAGATGATAGGGATGTTGCCGAAGTTTTAATGGAGAGCCATGAAGTTTTCTTGAGCACCCTTAGATCTCGTTTGACAAAGTTACAGGTGATACGACACTTCTTTGAGAGGAATGATATGAAAGGTGCAATAAATGCAATGAGGAAGCTCCCGGATCATTCAGTTCAGGCAGATGTTGTTGGGATTCTGATGGAGAAAATGGATATGCTCAACTTGGATTTGTTTTCTTCCTTGCTTCCCGTGCTTGTCAGTCTGCTTGATAGCAAGATCGAAAGGCACACTAGTCTTTCCTTGGAGATGCTACTAAAGCTAGTGGCAGTTTTTGGCTCGTTGGTGTTTGCCACTGTTTCAGCGCCCCCGACTGTTGGGGTCGATCTTCATGCAGAGCAAAGGAGAGAGTGCTGTAATCAGTGCTTTGCCCAGCTCCAAAAGATCCAGAAGATTCTCCCTCTTCTTGTAAGACGCGGCGGTGTTGTTGCAAGGTGCGCTCAGGAATTGAATCTCGTCCTTCAACAATCGTAG |
| Protein: MGLRRSKDVVVRGLTGHRSNCTSVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHTRSISTIRFTPDGRWVVSGGYDNIVKVWDLTAGKLLHDFKFHENHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSITFHPDGRTLFCGLDDSLKVYSWEPVICHDSIDMGWSTLSDLCIHEGKLLGCSYYQNSVGVWVSDISLIEPYGANLVPPQKDVMQHEFNLQKSHSVKKGSDERSISSLRCPSPDYETKEIKNIYVDTANGNPVCSERVGSLSSPKIILPLDSPDIGSPMVKKHTSSAKGSPEKAREQAFLKSFSVPDVALQESAEGKDSSVPRKESITFSRTKPGMLLKPAHRRRPSTTKLDAEGLSLTAEMKNISETKSISDSSDPMLPKLTAHRRRLSSTRFDVETLSDSSESRTFSETKVDFNGPLDTGIKIAPGTPKESPQEDCSDIKNVPEKIDKTLPQTPKDENRDESLCSRQGITPVKIVNGVAVVPGRTRTLVEKFERREILNSAEEQTTATPPQELPATDKANTSVPMSFERKETVSSSSNQSTDSSPSLISARSQTPATSVCSSESREEMLKSTEDQETSRLIPCMEPSRSKTPPIPNSSIDKRERHNSKEDQETAVSHNVVVLARDKAPSSQVDAFVRRERLSIKEDREATAVPNVVLGKDRTPTCRVGSSERRQRLNKEDQSASIISPNVALGRDKVPPNQVGRFERRERFNSKEDQPTRISSRIAPSRERTPPSLGGSIQRRERLSSPEDQAANRVLPVMERTTAAAGSFEERERFNSTMEDQESNIPLRTVSVIDKMATTQMGESQILGREPDSADDRDVAEVLMESHEVFLSTLRSRLTKLQVIRHFFERNDMKGAINAMRKLPDHSVQADVVGILMEKMDMLNLDLFSSLLPVLVSLLDSKIERHTSLSLEMLLKLVAVFGSLVFATVSAPPTVGVDLHAEQRRECCNQCFAQLQKIQKILPLLVRRGGVVARCAQELNLVLQQS |